Release

v1.1.1

• add model_log parameter to Run() function.

  • If model_log=True, show structures of encoder and decoders. Default: False.

• fix bugs

v1.1.0

• Get_label_Prior() function changes:

  • Get_label_Prior() -> get_prior()

  • set alpha=2 as default

• Run() function parameter changes:

  • labmda_recon -> lambda_recon

  • Prior -> prior

  • max_iteration -> iteration

  • add use_rep for mode=d

• add TFIDF_LSI() function for scATAC preprecess.

• remove AnnData returns in filter_data() and batch_scale() functions.

  • e.g., change adata=up.filter_data(adata) to up.filter_data(adata).

v1.0.5

Parameter fixes.