uniport.filter_data

uniport.filter_data(adata: AnnData, min_features: int = 0, min_cells: int = 0, log=None)[source]

Filter cells and genes

Parameters:

  • adata – An AnnData matrice of shape n_obs × n_vars. Rows correspond to cells and columns to genes.

  • min_features – Filtered out cells that are detected in less than n genes. Default: 0.

  • min_cells – Filtered out genes that are detected in less than n cells. Default: 0.